python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T108_b3_Kidney_PCW17 2 -revcomp | gzip > L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T108_b3_Kidney_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T181_b3_Kidney_PCW19 2 -revcomp | gzip > L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T181_b3_Kidney_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T284_b3_Kidney_PCW14 2 -revcomp | gzip > L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T284_b3_Kidney_PCW14.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T309_b3_Kidney_PCW21 2 -revcomp | gzip > L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T309_b3_Kidney_PCW21.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T359_b3_Kidney_PCW20 2 -revcomp | gzip > L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T359_b3_Kidney_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T373_b3_Kidney_PCW15 2 -revcomp | gzip > L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T373_b3_Kidney_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T389_b3_Kidney_PCW13 2 -revcomp | gzip > L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T389_b3_Kidney_PCW13.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL33_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL34_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL36_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL38_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL39_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL40_b3_ATAC_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L1-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L2-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L3-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-0-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-1-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-2-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-3-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-4-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-5-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-6-9/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-0/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-1/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-2/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-3/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-4/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-5/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-6/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-7/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL49_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL50_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL52_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL54_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL55_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T65_b3_Kidney_PCW18 2 -revcomp | gzip > L4-7-8/SL56_b3_RNA_kidney.barcodes_annotated.barcode_T65_b3_Kidney_PCW18.RNA_UMI.end1.fastq.gz